You are viewing the site in preview mode

Skip to main content

Advertisement

Table 2 Specificities of 13 type-specific probes employed in multiplex HPyV genotyping

From: Multiplex detection in tonsillar tissue of all known human polyomaviruses

Target sequence HPyV type-specific probe (MFI)
BKPyV JCPyV KIPyV WUPyV MCPyV HPyV6 HPyV7 TSPyV HPyV9 HPyV10 HPyV11 HPyV12 HPyV13
BKPyV 2105 43 35 36 33 54 42 27 34 34 44 35 19
JCPyV 39 1145 32 32 32 34 34 24 39 28 47 32 20
KIPyV 49 48 2522 45 42 43 43 38 48 44 59 47 17
WUPyV 33 36 29 5704 31 31 65 18 35 26 43 29 19
MCPyV 46 46 37 38 2736 45 41 31 40 37 49 39 21
HPyV6 38 38 34 32 33 3196 35 30 34 31 44 35 23
HPyV7 43 46 38 52 35 42 2574 29 41 41 51 37 18
TSPyV 52 52 45 74 42 46 64 2894 47 42 58 47 19
HPyV9 50 48 44 40 47 47 39 29 1388 39 54 49 18
HPyV10 38 36 33 32 34 36 32 21 33 5116 47 31 24
HPyV11 47 56 42 51 45 66 61 57 59 58 1782 66 17
HPyV12 55 50 42 48 45 50 46 38 46 39 61 681 20
HPyV13 39 42 36 36 37 39 40 27 40 35 48 37 2327
Mix HPyVs 745 1367 1518 2884 1511 1586 1125 733 603 2639 612 326 1631
cutoff 85 81 77 81 77 83 77 75 81 72 107 73 127
  1. Each line represents a single well with each HPyV plasmid (105 copies/μL) or plasmid mix hybridized to a mixture of 13 distinct beads