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Fig. 1 | BMC Infectious Diseases

Fig. 1

From: Genetic diversity of Mycobacterium tuberculosis isolates from Tochigi prefecture, a local region of Japan

Fig. 1

ML phylogenetic trees based on SNP concatenated sequence alignments of clinical isolates. ML phylogenetic trees of 169 clinical isolates based on whole genome analysis. Radial rectangular tree layouts are shown for the years of M. tuberculosis isolation, a 2007 and b 2013. Bootstrap values are shown in the phylogenetic trees. Clades show Lineage 1 (red), Lineage 2 (orange [Modern/typical] and yellow [Ancestral/atypical]), Lineage 3 (green) and Lineage 4 (blue). Scale bars indicate nucleotide substitutions per site. Black circles indicate foreign-born TB patients

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