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Table 1 Isolates included in study with VNTR alleles

From: Multilocus variable-number tandem-repeat analysis of clinical isolates of Aspergillus flavus from Iran reveals the first cases of Aspergillus minisclerotigenesassociated with human infection

Strain designation Morphological (molecular1) identification Country of origin Source Aflatoxin production VNTR allele size (bp) MLV genotype MAT allele
      AFPM1 AFPM4 AFPM5 AFPM6 AFPM7   
Iranian clinical and non-clinical isolates
65822 A. flavus Iran Sinus Neg 122 205 215 345 256 1  
65712 A. flavus Iran Sinus Neg 122 226 213 345 256 2  
9573 A. flavus Iran Sputum Neg 122 219 215 345 193 3  
2117 A. flavus Iran Nail Neg 122 217 215 345 250 5  
1608 A. flavus Iran Nail Neg 122 195 215 345 248 7  
65895 A. flavus Iran Neck Neg 122 220 215 345 193 8  
2037 A. flavus Iran Nail Neg 122 213 213 345 239 9  
65770 A. flavus Iran Sinus Neg 122 215 215 435 245 10  
1097 A. flavus Iran Nail Neg null 220 215 345 248 11  
65836 A. flavus Iran Sinus Neg 122 207 215 345 258 12  
65811 A. flavus Iran Sinus Neg 122 220 215 345 300 13  
65483 A. flavus Iran Sinus Neg 122 213 215 345 248 14  
2141 A. flavus Iran Nail Neg 122 220 213 345 254 15  
65829 A. flavus Iran Lung Neg 122 205 215 345 256 1  
66041 A. flavus (A. minisclerotigenes) Iran Paranasal Pos (B + trace G) 119 201 237 342 219 16 2
2165 A. flavus Iran Nail Neg 122 211 213 345 256 17  
65938 A. flavus Iran Sinus Pos 122 207 215 345 254 18  
65931 A. flavus Iran Sinus Neg 122 201 213 345 256 19  
1698 A. flavus Iran Nail Neg 122 209 213 345 245 20  
66246 A. flavus Iran Paranasal Neg 122 228 215 347 263 21  
66204 A. oryzae Iran Sinus Neg 122 203 213 345 256 22  
65760 A. flavus Iran Sinus Neg 122 219 213 null 254 23  
65838 A. flavus Iran Lung (ball) Neg 122 197 213 345 241 24  
292 A. flavus Iran Nail Neg 122 211 215 345 256 25  
2666 A. flavus Iran Nail Neg 122 215 215 345 254 26  
65817 A. flavus Iran Sinus Pos 122 215 215 345 256 27  
65728 A. flavus (?) Iran Sinus Pos (B + trace G) 123 197 211 348 null 28 1
4521 A. flavus Iran Nail Neg 122 215 215 345 248 29  
2328 A. flavus Iran Nail Neg 122 222 215 347 252 30  
65805 A. flavus Iran Sinus Neg 122 205 215 345 256 1  
489 A. flavus Iran Nail Neg 122 215 215 345 248 29  
66262 A. flavus Iran Sinus Neg 122 211 213 345 193 31  
66086 A. flavus Iran Paranasal Neg 122 203 213 349 246 32  
66161 A. flavus (A. minisclerotigenes) Iran Sinus Pos (B + G) 119 201 235 346 219 33 1
66150 A. flavus Iran Paranasal Neg 122 205 213 345 193 34  
66666 A. flavus Iran Endocard Neg 122 195 213 345 256 35  
1750 A. flavus Iran Nail Neg 122 199 213 345 253 37  
66137 A. flavus Iran Paranasal Neg 122 209 213 345 245 20  
65718 A. flavus Iran Sinus Neg 122 225 213 346 256 38  
64726 A. flavus Iran Sinus Neg 122 215 215 345 248 29  
64729 A. flavus Iran Sputum Neg 122 195 215 345 248 7  
65932 A. flavus Iran Sinus Neg 122 195 215 345 252 39  
65717(1) A. flavus Iran Sinus Neg 122 213 213 345 193 40  
65717(2)2 A. flavus Iran Sinus Neg 122 213 213 345 193 40  
ES1 A. flavus Iran Pistachio Neg 122 215 215 345 248 29  
ES2 A. flavus Iran Pistachio Neg 122 215 215 345 264 41  
65841 A. flavus Iran Paranasal Neg 122 218 215 345 256 44  
65848 A. flavus Iran Sputum Neg 122 217 213 345 241 45  
TR A. flavus Iran Soil Pos 122 205 215 347 null 42  
NTR A. flavus Iran Soil Neg 122 219 215 345 null 43  
65806 A. flavus Iran Environment Neg 122 219 215 345 193 3  
65824 A. flavus Iran Environment Neg 122 205 215 345 256 1  
65773 A. flavus Iran Environment Neg 122 219 213 347 249 46  
66130 A. flavus Iran Environment Neg 122 205 213 345 193 34  
65844 A. flavus Iran Environment Neg 122 228 213 345 256 47  
4941 A. flavus Iran Environment Neg 122 195 215 345 193 48  
Australian clinical and non-clinical isolates
A5 A. flavus Australia Paranasal Neg 122 199 213 null 239 49  
C3 A. flavus Australia Ear Neg 122 197 213 345 241 24  
E3 A. flavus Australia Sputum Neg 122 188 213 345 252 53  
E4 A. flavus Australia Sputum Neg 122 207 215 345 260 54  
FRR 53053 A. flavus Australia Soil Pos 122 196 215 344 243 50  
FRR 5309 A. minisclerotigenes Australia Soil Neg 119 186 271 342 219 51 1
FRR 5314 A. flavus Australia Soil Neg 122 188 213 344 249 52  
Type strains 3
NCPF 2008 A. flavus Unknown Ear Neg 122 203 213 345 239 4 1 + 2
PTCC 5006 A. flavus (A. tamarii) Iran   Neg 122 159 213 343 221 61 1
JCM 2061 A. flavus Japan   Neg 122 215 213 345 244 6 1 + 2
IMI 126842 A. oryzae USA Chinese soy sauce Neg 122 189 215 345 275 65 2
ATCC 15517 A. parasiticus Japan   Pos 116 181 244 350 241 63  
NRRL 255 A. parasiticus USA Soil Pos 116 181 245 350 235 62 1
IMI 191303 A. sojae Japan   Neg 116 181 230 363 231 64  
A. flavus "Group II" isolates 4
FRR 2755 A. flavus (A. minisclerotigenes) Australia Peanuts Neg 119 196 287 342 219 55  
FRR 4472 A. flavus (A. minisclerotigenes) Australia Environment Pos (B + G) 119 186 341 342 219 60 1
FRR 4086 A. flavus (A. minisclerotigenes) Australia Environment Neg 119 186 271 342 219 66 1
LA2-5 SB A. flavus (?) USA Soil Pos (B) 119 184 215 348 235 56 1
MS22-41 SB A. flavus (?) USA Soil? Pos (B) 119 186 217 348 271 57  
FRR 3384 A. flavus (A. minisclerotigenes) Africa Sunflower seeds   119 188 319 344 219 58 2
FRR 3382 A. flavus (A. minisclerotigenes) Africa Sunflower seeds   119 186 282 342 217 59  
M40 No1 A. flavus (A. minisclerotigenes) South America Environment Neg 119 186 303 342 219 67 1
MEA 511 A. flavus (A. minisclerotigenes) South America Environment Pos (B + G) 119 186 319 342 219 68 1
MEA 352 A. flavus (A. minisclerotigenes) South America Environment Pos (B + G) 119 186 267 342 219 69 1
  1. 1Molecular identification based on MLVA and on b-tubulin and calmodulin phylogeny; only listed if different to morphological identification.
  2. 2From same infection as 657 17(1).
  3. 3FRR: Food Research Laboratory, CSIRO (Australia); PTCC: Persian Type Culture Collection (Iran); JCM: Japanese Collection of Microorganisms; NCPF: National Collection of Pathogenic Fungi (UK) IMI: International Mycological Institute (UK) ATCC: American Type Culture Collection (USA); NRRL: National Regional Reference Laboratory (USA).
  4. 4VNTR data taken from [3] with 3 bp subtracted from each locus size to account for modified primers.